Stem-loop isc-mir-315

Accession

MI0012278

Description

Ixodes scapularis isc-mir-315 precursor miRNA

Literature search

1 open access papers mention isc-mir-315
(1 sentences)

Sequence

cugcgguacuccuucucagcUUUUGAUUGUUGCUCAGAAGGCguggcaaucugacaagccuucgagugacuaucaaaucuuguggagacgccaauucguca
....(((....((((.(((..((((((.(((((((.((((((.((.........)).))))))))))))).))))))..))).))))..))).........

Structure

-----cugc   acuc    u   cU      U       A      g  gca 
         ggu    cuuc cag  UUUGAU GUUGCUC GAAGGC ug   a
         |||    |||| |||  |||||| ||||||| |||||| ||   u
         ccg    gagg guu  aaacua cagugag cuuccg ac   c
acugcuuaa   --ca    u   cu      u       -      a  agu 

Annotation confidence Not enough data

Genome context

DS711462: 57333-57433 [+]

Mature isc-miR-315

• Accession: MIMAT0012698
• Description: Ixodes scapularis isc-miR-315 mature miRNA
• Sequence: 21 - UUUUGAUUGUUGCUCAGAAGGC - 42
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68