Stem-loop isc-mir-87

Accession

MI0012287

Description

Ixodes scapularis isc-mir-87 precursor miRNA

Gene family

MIPF0000152; mir-87

Literature search

1 open access papers mention isc-mir-87
(2 sentences)

Sequence

cacacaucucgcuucuugacugccugccugaaaauuugucucaaaccuuucauaguguagGUGAGCAAAGUUUCAGGUGUGuugucuuggaggacacacug
........((.((((..(((.((.(((((((((.((((.(((..((((..........))))))))))).))))))))).)).)))..)))))).......

Structure

cacacauc  g    uu   u  c         a    u   aa    uuca 
        uc cuuc  gac gc ugccugaaa uuug cuc  accu    u
        || ||||  ||| || ||||||||| |||| |||  ||||     
        ag gagg  cug uG GUGGACUUU AAAC GAG  UGga    a
-gucacac  -    uu   u  U         G    -   --    ugug 

Annotation confidence Not enough data

Genome context

DS929532: 41471-41571 [-]

Mature isc-miR-87

• Accession: MIMAT0012707
• Description: Ixodes scapularis isc-miR-87 mature miRNA
• Sequence: 61 - GUGAGCAAAGUUUCAGGUGUG - 81
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68