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miRBase |
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Stem-loop sequence bmo-mir-1175 |
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Accession | MI0012300 (change log) | |||||
Description | Bombyx mori miR-1175 stem-loop | |||||
Gene family | MIPF0000715; mir-1175 | |||||
Literature search |
2 open access papers mention bmo-mir-1175 | |||||
Stem-loop |
-guga -a - -ug uc u uua 5' cag uuaagu ggagg uga ucu cacuuu u ||| |||||| ||||| ||| ||| |||||| 3' guc aauuca ccucc acu aga gugaaa g gcuag cc a uca -u - uuu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence bmo-miR-1175-5p |
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Accession | MIMAT0013612 |
Sequence |
11 - aaguggaggugugaucucuuca - 32 |
Deep sequencing | 1222 reads, 2 experiments |
Evidence | experimental; Illumina [1], SOLID [2] |
Database links |
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Mature sequence bmo-miR-1175-3p |
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Accession | MIMAT0013613 |
Sequence |
49 - ugagauucaacuccuccaacuuaa - 72 |
Deep sequencing | 95 reads, 3 experiments |
Evidence | experimental; Illumina [1], SOLID [2] |
Database links |
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References |
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1 |
PMID:20199675
"MicroRNAs of Bombyx mori identified by Solexa sequencing"
BMC Genomics. 11:148(2010).
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2 |
PMID:20229201
"Novel microRNAs in silkworm (Bombyx mori)"
Funct Integr Genomics. 10:405-415(2010).
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