Stem-loop sequence bmo-mir-2789

Accession MI0012362
Description Bombyx mori miR-2789 stem-loop
Stem-loop 
c  -   uuauu  ug a    uu        uc    -uug    g 
 cg ugu     uc  u cucu  auuuucug  acag    uucu u
 || |||     ||  | ||||  ||||||||  ||||    |||| c
 gc aca     ag  g gagg  ugaaagau  uguc    aagg g
-  g   ugcuu  gu -    uu        gc    ugua    u
Get sequence
Deep sequencing
7 reads, 2 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf2829: 2720918-2721010 [-]
intergenic

Mature sequence bmo-miR-2789

Accession MIMAT0013686
Sequence

63 -  

guagaaaguuuggagguggau

 - 83

Get sequence
Deep sequencing 7 reads, 2 experiments
Evidence experimental; Solexa [1]

References

1
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).