Stem-loop sequence bmo-mir-2813-2

Accession MI0012436
Description Bombyx mori miR-2813-2 stem-loop
Gene family MIPF0001043; mir-2813
Stem-loop 
ccaagcc     -     uua      u   aaga     c 
       aaauu cuaga   agccgu gga    cguca c
       ||||| |||||   |||||| |||    |||||  
       uuuga gauuu   uuggca ccu    gcagu a
uuguaau     c     ---      u   -aaa     g
Get sequence
Deep sequencing
13 reads, 2 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf2838: 20610-20688 [+]
intergenic
scaffold10050: 575-653 [-]
intergenic
scaffold17134: 238-316 [+]
intergenic

Mature sequence bmo-miR-2813

Accession MIMAT0013721
Sequence

11 -  

uucuagauuaagccguuggaa

 - 31

Get sequence
Deep sequencing 55 reads, 3 experiments
Evidence experimental; Solexa [1]

References

1
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).