Stem-loop sequence bmo-mir-2780c

Accession MI0012451
Description Bombyx mori miR-2780c stem-loop
Gene family MIPF0000828; mir-2780
Stem-loop 
-   cggu  aaa      -       agacuuagggcuucgggc 
 cca    ga   gggcgu uaaauga                  a
 |||    ||   |||||| |||||||                  u
 ggu    cu   cucgua guuugcu                  a
a   -aau  --g      a       acaggacaaaaagaaccu
Get sequence
Deep sequencing
78 reads, 3 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf1566: 19396-19483 [+]
intergenic

Mature sequence bmo-miR-2780c

Accession MIMAT0013760
Sequence

11 -  

aagggcguuaaaugaagacuuag

 - 33

Get sequence
Deep sequencing 21 reads, 2 experiments
Evidence experimental; Solexa [1]

References

1
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).