Stem-loop sequence bmo-mir-2849-3

Accession MI0012472
Description Bombyx mori miR-2849-3 stem-loop
Gene family MIPF0000876; mir-2849
Stem-loop 
gugga     -a      ---  a      ac  a      --a      a 
     cguuu  acuuua   cg uuaugg  uc guucca   aagaua c
     |||||  ||||||   || ||||||  || ||||||   |||||| u
     guaaa  uggagu   gc gguacc  ag cagggu   uuuugu g
guaaa     gg      ugg  -      aa  -      gua      a
Get sequence
Deep sequencing
5 reads, 2 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf3052: 393771-393867 [+]
intergenic

Mature sequence bmo-miR-2849

Accession MIMAT0013769
Sequence

11 -  

aacuuuacgauuauggacucag

 - 32

Get sequence
Deep sequencing 19 reads, 2 experiments
Evidence experimental; Solexa [1]

References

1
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).