miRBase entry: mdv2-mir-M32

Stem-loop mdv2-mir-M32


Accession
MI0012487
Description
Mareks disease virus type 2 mdv2-mir-M32 precursor miRNA


Sequence

cugcgAUUCCAUCCUUCGACUAGCGACUuguuauggcgggUAAUAGCCGGACGACGGAGUCUcgg
(((.((((((.((.((((.(((...((((((....))))))..))).)))).)).)))))).)))

Structure
   c      A  C    A   GCG      u 
cug gAUUCC UC UUCG CUA   ACUugu a
||| |||||| || |||| |||   ||||||  
ggc CUGAGG AG AGGC GAU   Ugggcg u
   U      C  C    C   -AA      g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mdv2-miR-M32-5p

Accession MIMAT0012732
Description Mareks disease virus type 2 mdv2-miR-M32-5p mature miRNA
Sequence 6 - AUUCCAUCCUUCGACUAGCGACU - 28
Evidence experimental
Illumina [1]

Mature mdv2-miR-M32-3p

Accession MIMAT0012733
Description Mareks disease virus type 2 mdv2-miR-M32-3p mature miRNA
Sequence 41 - UAAUAGCCGGACGACGGAGUCU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19328516
    MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific
    "Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J"
    "Virology (2009) 388:128-136