miRBase entry: mdo-mir-195

Stem-loop mdo-mir-195


Accession
MI0012517
Description
Monodelphis domestica mdo-mir-195 precursor miRNA
Gene family
MIPF0000006; mir-15


Sequence

1848 reads, 39 reads per million, 5 experiments
cccuggcuuUAGCAGCACAAAAAUAUUGGCAccugagggaaagccaugccaguauugagagugcugcucuag
..((((....((((((((...((((((((((.....((.....)).))))))))))....))))))))))))

Structure
cc    cuuU        -AAA          ccuga  g 
  cugg    AGCAGCAC    AAUAUUGGCA     gg a
  ||||    ||||||||    ||||||||||     || a
  gauc    ucgucgug    uuaugaccgu     cc a
--    ----        agag          ----a  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 255708032-255708103 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-195
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-195

Accession MIMAT0012760
Description Monodelphis domestica mdo-miR-195 mature miRNA
Sequence 10 - UAGCAGCACAAAAAUAUUGGCA - 31
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39