miRBase entry: mml-mir-129-2

Stem-loop mml-mir-129-2


Accession
MI0012532
Description
Macaca mulatta mml-mir-129-2 precursor miRNA
Gene family
MIPF0000073; mir-129

Literature search
1 open access papers mention mml-mir-129-2
(1 sentences)

Sequence

224376 reads, 1376 reads per million, 9 experiments
cugcccuucgugaauCUUUUUGCGGUCUGGGCUUGCuguacauaacucaauagccggAAGCCCUUACCCCAAAAAGCAuucgcggagggcgc
.(((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).)))))))))))))).

Structure
c              -       C   CU      ---     acau 
 ugcccuucgugaau CUUUUUG GGU  GGGCUU   GCugu    a
 |||||||||||||| ||||||| |||  ||||||   |||||     
 gcgggaggcgcuuA GAAAAAC CCA  CCCGAA   cgaua    a
c              C       C   UU      ggc     acuc 


Annotation confidence High
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Genome context
chr14: 22449808-22449899 [-]

Database links

Mature mml-miR-129-5p

Accession MIMAT0006185
Description Macaca mulatta mml-miR-129-5p mature miRNA
Sequence 16 - CUUUUUGCGGUCUGGGCUUGC - 36
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-129-2-3p

Accession MIMAT0031083
Description Macaca mulatta mml-miR-129-2-3p mature miRNA
Sequence 58 - AAGCCCUUACCCCAAAAAGCA - 78
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45