miRBase entry: ptr-mir-373

Stem-loop ptr-mir-373


Accession
MI0012564
Description
Pan troglodytes ptr-mir-373 precursor miRNA
Gene family
MIPF0000500; mir-373


Sequence

gggauACUCAAAAUGGGGGCGCUUUCCuuuuuguccguacugggaagugcuccgauuuugggguguccc
((((((((((((((.((((((((((((..............)))))))))))).))))).)))))))))

Structure
         -     G            uuuuug 
gggauACUC AAAAU GGGGCGCUUUCC      u
||||||||| ||||| ||||||||||||       
cccuguggg uuuua ccucgugaaggg      c
         g     g            ucaugc 


Annotation confidence Not enough data
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Genome context
chr19: 56134732-56134800 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptr-mir-373
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-373

Accession MIMAT0012802
Description Pan troglodytes ptr-miR-373 mature miRNA
Sequence 6 - ACUCAAAAUGGGGGCGCUUUCC - 27
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39