miRBase entry: ptr-mir-497

Stem-loop ptr-mir-497


Accession
MI0012565
Description
Pan troglodytes ptr-mir-497 precursor miRNA
Gene family
MIPF0000231; mir-497


Sequence

cCAGCAGCACACUGUGGUUUGUAcggcacuguggccacguccaaaccacacugugguguuagagcgagg
..((((.((((.(((((((((.(((((......)))..)).))))))))).)))).)))).........

Structure
-------cC    G    C         U  --   ac 
         AGCA CACA UGUGGUUUG Ac  ggc  u
         |||| |||| ||||||||| ||  |||   
         uugu gugu acaccaaac ug  ccg  g
ggagcgaga    g    c         c  ca   gu 


Annotation confidence Not enough data
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Genome context
chr17: 7272971-7273039 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-497
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-497

Accession MIMAT0012803
Description Pan troglodytes ptr-miR-497 mature miRNA
Sequence 2 - CAGCAGCACACUGUGGUUUGUA - 23
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39