miRBase entry: ptr-mir-570

Stem-loop ptr-mir-570


Accession
MI0012566
Description
Pan troglodytes ptr-mir-570 precursor miRNA
Gene family
MIPF0000317; mir-548


Sequence

uuauuagguugaugcaaagguaauugccguuuuugccaucacuuucaauagCGAAAACUGCAAUAACCUUUGCaccaaccu
.....((((((.(((((((((.(((((.((((((((.((........)).)))))))).))))).))))))))).))))))

Structure
uuauu      a         a     c        c  cac 
     agguug ugcaaaggu auugc guuuuugc au   u
     |||||| ||||||||| ||||| |||||||| ||    
     uccaac aCGUUUCCA UAACG CAAAAGCg ua   u
-----      c         A     U        a  acu 


Annotation confidence Not enough data
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Genome context
chr3: 64542138-64542218 [+]

Database links

Mature ptr-miR-570

Accession MIMAT0012804
Description Pan troglodytes ptr-miR-570 mature miRNA
Sequence 52 - CGAAAACUGCAAUAACCUUUGC - 73
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39