miRBase entry: ptr-mir-596

Stem-loop ptr-mir-596


Accession
MI0012569
Description
Pan troglodytes ptr-mir-596 precursor miRNA
Gene family
MIPF0000808; mir-596


Sequence

agcacggccucuccgAAGCCUGCCCGGCUCCGCGGGaaccugccucccgcauggcagcugcugcccuucagaggccg
....((((((((..((((...((.(((((((((((((.......))))))..)).)))))..)).))))))))))))

Structure
agca        cc    CCU  -C     -  --      ac 
    cggccucu  gAAG   GC  CGGCU CC  GCGGGa  c
    ||||||||  ||||   ||  ||||| ||  ||||||  u
    gccggaga  cuuc   cg  gucga gg  cgcccu  g
----        --    --c  uc     c  ua      cc 


Annotation confidence Not enough data
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Genome context
chr8: 1909802-1909878 [+]

Database links

Mature ptr-miR-596

Accession MIMAT0012807
Description Pan troglodytes ptr-miR-596 mature miRNA
Sequence 16 - AAGCCUGCCCGGCUCCGCGGG - 36
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39