miRBase entry: ptr-mir-604

Stem-loop ptr-mir-604


Accession
MI0012571
Description
Pan troglodytes ptr-mir-604 precursor miRNA
Gene family
MIPF0000562; mir-604


Sequence

agagcaucgugcuugaccuuccacgcuccuguguccacuagcaggcagguuuucugacacAGGCUGCGGGAUUCAGGACagugcaucauggaga
.((((((.((.(((((...(((.(((.((((((((....(((......)))....))))))))..)))))).))))))).)))).)).......

Structure
------a  -    c  g     ccu   a   -u        cacu   ag 
       ga gcau gu cuuga   ucc cgc  ccuguguc    agc  g
       || |||| || |||||   ||| |||  ||||||||    |||   
       cu cgug CA GGACU   AGG GCG  GGAcacag    uug  c
agaggua  a    a  -     --U   -   UC        ucuu   ga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr10: 30534527-30534620 [-]

Database links

Mature ptr-miR-604

Accession MIMAT0012809
Description Pan troglodytes ptr-miR-604 mature miRNA
Sequence 61 - AGGCUGCGGGAUUCAGGAC - 79
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39