miRBase entry: ptr-mir-670

Stem-loop ptr-mir-670


Accession
MI0012578
Description
Pan troglodytes ptr-mir-670 precursor miRNA
Gene family
MIPF0000734; mir-670


Sequence

gguggaccugaugUCCCUGAGUGUAUGUGGUGAAccugaauuuaccuuggguuuccucauauucauucaggagugucaguugccccuuc
((.(((.((((((.(((((((((.((((((.((((((((.......)))))))).).))))).)))))))).))))))).).))))...

Structure
---  u  - c      U -        U     - U        au 
   gg gg a cugaug C CCUGAGUG AUGUG G GAAccuga  u
   || || | |||||| | |||||||| ||||| | ||||||||  u
   cc cc u gacugu g ggacuuac uauac c uuuggguu  a
cuu  -  g u      - a        u     u c        cc 


Annotation confidence Not enough data
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Genome context
chr11: 43743297-43743385 [+]

Database links

Mature ptr-miR-670

Accession MIMAT0012816
Description Pan troglodytes ptr-miR-670 mature miRNA
Sequence 14 - UCCCUGAGUGUAUGUGGUGAA - 34
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39