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miRBase |
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Stem-loop sequence rno-mir-490 |
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Accession | MI0012585 (change log) | ||||
Description | Rattus norvegicus miR-490 stem-loop | ||||
Gene family | MIPF0000229; mir-490 | ||||
Literature search |
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8 open access papers mention rno-mir-490 | ||||
Stem-loop |
uggaaaguucauugu c -- g cac uua 5' ucgaca caugga ucuccaggu ggu gu g |||||| |||||| ||||||||| ||| || 3' aguugu guaccu ggaggucca cca ca a --------------- c ca a --- uau |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
Mature sequence rno-miR-490-5p |
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Accession | MIMAT0017356 |
Previous IDs | rno-miR-490* |
Sequence |
22 - ccauggaucuccaggugggu - 41 |
Deep sequencing | 2295 reads, 227 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
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Mature sequence rno-miR-490-3p |
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Accession | MIMAT0012823 |
Previous IDs | rno-miR-490 |
Sequence |
59 - caaccuggaggacuccaugcug - 80 |
Deep sequencing | 88559 reads, 420 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
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References |
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1 |
PMID:18215311
"miRNAminer: a tool for homologous microRNA gene search"
BMC Bioinformatics. 9:39(2008).
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2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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