Accession
MI0012593
Description
Rattus norvegicus
rno-mir-544 precursor miRNA
Gene family
MIPF0000436;
mir-544
Sequence
251
reads,
10
reads per million, 87 experiments
caccuagggauCUUGUUAAAAAGCAGAUUCUgauugagggaccaagAUUCUGCAUUUUUAGCAAGCUcucaagugaug
(((...((((.((((((((((((((((.(((.............))).))))).))))))))))).))))..)))...
(((...((((.((((((((((((((((.(((.............))).))))).))))))))))).))))..)))...
Structure
--- cua u - U gauug cac ggga CUUGUUAAAAA GCAGA UCU a ||| |||| ||||||||||| ||||| ||| g gug cucU GAACGAUUUUU CGUCU Aga g gua -aa C A U accag
Annotation confidence
High
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Genome context
chr6: 133879169-133879246 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from rno-mir-544
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rno-miR-544-5p
| Accession | MIMAT0017359 |
| Description | Rattus norvegicus rno-miR-544-5p mature miRNA |
| Sequence | 12 - CUUGUUAAAAAGCAGAUUCU - 31 |
| Evidence |
experimental
SOLiD [2] |
Mature rno-miR-544-3p
| Accession | MIMAT0012831 |
| Description | Rattus norvegicus rno-miR-544-3p mature miRNA |
| Sequence | 47 - AUUCUGCAUUUUUAGCAAGCU - 67 |
| Evidence |
experimental
SOLiD [2] |
References
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