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miRBase |
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Stem-loop sequence rno-mir-582 |
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Accession | MI0012595 (change log) | ||||
Description | Rattus norvegicus miR-582 stem-loop | ||||
Gene family | MIPF0000417; mir-582 | ||||
Literature search |
5 open access papers mention rno-mir-582 | ||||
Stem-loop |
----- aua ca uaaucu 5' acucuuugg caguuguucaac guuac a ||||||||| |||||||||||| ||||| 3' ugggaaacc gucaacaaguug caaug a aaacg caa uc uuaauc |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
Mature sequence rno-miR-582-5p |
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Accession | MIMAT0012833 |
Previous IDs | rno-miR-582 |
Sequence |
11 - uacaguuguucaaccaguuacu - 32 |
Deep sequencing | 21857 reads, 428 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
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Mature sequence rno-miR-582-3p |
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Accession | MIMAT0017360 |
Previous IDs | rno-miR-582* |
Sequence |
48 - aaccuguugaacaacugaaccc - 69 |
Deep sequencing | 158175 reads, 487 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
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References |
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1 |
PMID:18215311
"miRNAminer: a tool for homologous microRNA gene search"
BMC Bioinformatics. 9:39(2008).
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2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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