Stem-loop rno-mir-294

Accession

MI0012610

Description

Rattus norvegicus rno-mir-294 precursor miRNA

Gene family

MIPF0000068; mir-290

Literature search

6 open access papers mention rno-mir-294
(29 sentences)

Sequence

313 reads, 6 reads per million, 64 experiments

auagccaugCUCAAAAUGGAGGCCCUAUCUaagcuuuuaaguagaaagugcuuccauuuuguguguugcug
.((((.((((.((((((((((((.((.(((..(((....)))))).)).)))))))))))).)))).))))

Structure

a    c    U            C  A   aa   u 
 uagc augC CAAAAUGGAGGC CU UCU  gcu u
 |||| |||| |||||||||||| || |||  |||  
 gucg ugug guuuuaccuucg ga aga  uga u
-    u    u            u  a   --   a 

Annotation confidence Not enough data

Genome context

chr1: 64536746-64536816 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from rno-mir-294

Mature rno-miR-294

• Accession: MIMAT0012848
• Description: Rattus norvegicus rno-miR-294 mature miRNA
• Sequence: 10 - CUCAAAAUGGAGGCCCUAUCU - 30
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39