Stem-loop sequence rno-mir-764

Accession MI0012616
Description Rattus norvegicus miR-764 stem-loop
Gene family MIPF0000707; mir-764
Stem-loop 
u    ac     aa   uc  a     g   u   -   u           ccua 
 caac  aauca  auc  gg ggcag ugc cac aug ccuccuccaug    c
 ||||  |||||  |||  || ||||| ||| ||| ||| |||||||||||     
 guug  uuagu  uag  cc cuguc acg gug uac ggaggagguac    a
g    cu     --   ua  a     a   -   a   c           auac
Get sequence
Genome context
Coordinates (RGSC3.4) Overlapping transcripts
X: 31207234-31207341 [-]
sense
ENSRNOT00000048336 ; Q62842_RAT; intron 2
ENSRNOT00000048336 ; Q62842_RAT; intron 2
ENSRNOT00000048336 ; Q62842_RAT; intron 2
Clustered miRNAs
< 10kb from rno-mir-764
rno-mir-3552 X: 31209114-31209218 [-]
rno-mir-764 X: 31207234-31207341 [-]
rno-mir-1912 X: 31199363-31199450 [-]
Database links
  • ENTREZGENE: 100314274;Mir764

Mature sequence rno-miR-764-5p

Accession MIMAT0012854
Previous IDs rno-miR-764
Sequence

27 -  

ggugcucacauguccuccucca

 - 48

Get sequence
Evidence experimental; SOLiD [2]
Predicted targets

Mature sequence rno-miR-764-3p

Accession MIMAT0017370
Previous IDs rno-miR-764*
Sequence

65 -  

gaggaggccauaguggcaacugu

 - 87

Get sequence
Evidence experimental; SOLiD [2]
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).