miRBase entry: hvt-mir-H12

Stem-loop hvt-mir-H12


Accession
MI0012625
Description
Herpesvirus of turkeys hvt-mir-H12 precursor miRNA
Gene family
MIPF0000783; hvt-mir-H9


Sequence

uacUUUCUUAUGGACCGCCGAGGUGUGUCuauucguuaaCAGCUAGGCCGUCCAUGAGGUCGUA
(((..((((((((((.(((.((.(((............))).)).))).))))))))))..)))

Structure
   UU          C   G  G   GUCua 
uac  UCUUAUGGAC GCC AG UGU     u
|||  |||||||||| ||| || |||      
AUG  GGAGUACCUG CGG UC ACa     u
   CU          C   A  G   auugc 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Ywo et al. named this sequences hvt-mir-4 in [1].

Genome context
Unknown

Database links

Mature hvt-miR-H12-5p

Accession MIMAT0012863
Description Herpesvirus of turkeys hvt-miR-H12-5p mature miRNA
Sequence 4 - UUUCUUAUGGACCGCCGAGGUGUGUC - 29
Evidence experimental
cloned [1]

Mature hvt-miR-H12-3p

Accession MIMAT0012864
Description Herpesvirus of turkeys hvt-miR-H12-3p mature miRNA
Sequence 40 - CAGCUAGGCCGUCCAUGAGGUCGUA - 64
Evidence experimental
cloned [1]

References

  1. PubMed ID: 19403687
    Novel microRNAs (miRNAs) encoded by herpesvirus of Turkeys: evidence of miRNA evolution by duplication
    "Yao Y, Zhao Y, Smith LP, Watson M, Nair V"
    "J Virol (2009) 83:6969-6973