miRBase entry: hvt-mir-H15

Stem-loop hvt-mir-H15


Accession
MI0012628
Description
Herpesvirus of turkeys hvt-mir-H15 precursor miRNA


Sequence

cucUCGGAACAGGCGUAUUUUUUGCguauuuuaugaagcagCAAAGAUACGCAUGGGCUGAGGG
(((((((..((.((((((((((.((((.((....)).)).)))))))))))).))..)))))))

Structure
       AA  G          U  -  a  u 
cucUCGG  CA GCGUAUUUUU GC gu uu u
|||||||  || |||||||||| || || ||  
GGGAGUC  GU CGCAUAGAAA Cg cg ag a
       GG  A          -  a  a  u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Ywo et al. named this sequences hvt-mir-7 in [1].

Genome context
Unknown

Database links

Mature hvt-miR-H15-5p

Accession MIMAT0012868
Description Herpesvirus of turkeys hvt-miR-H15-5p mature miRNA
Sequence 4 - UCGGAACAGGCGUAUUUUUUGC - 25
Evidence experimental
cloned [1]

Mature hvt-miR-H15-3p

Accession MIMAT0012869
Description Herpesvirus of turkeys hvt-miR-H15-3p mature miRNA
Sequence 42 - CAAAGAUACGCAUGGGCUGAGGG - 64
Evidence experimental
cloned [1]

References

  1. PubMed ID: 19403687
    Novel microRNAs (miRNAs) encoded by herpesvirus of Turkeys: evidence of miRNA evolution by duplication
    "Yao Y, Zhao Y, Smith LP, Watson M, Nair V"
    "J Virol (2009) 83:6969-6973