Stem-loop eca-mir-1244

Accession

MI0012645

Description

Equus caballus eca-mir-1244 precursor miRNA

Gene family

MIPF0000569; mir-1244

Sequence

aaccauuccaguaacuuucuuugcauauguacuuagcuguacuauGAGUGGUUGGUUUGUAUGAGAUGGUU
(((((((.((..((((..((...((((.((((......))))))))...))..))))....)).)))))))

Structure

       c  --gu    uu  uug    u    uu 
aaccauu ca    aacu  cu   caua guac  a
||||||| ||    ||||  ||   |||| ||||   
UUGGUAG GU    UUGG  GG   Guau caug  g
       A  AUGU    UU  UGA    -    uc 

Annotation confidence Not enough data

Genome context

chr1: 12764826-12764896 [+]

Mature eca-miR-1244

• Accession: MIMAT0012888
• Description: Equus caballus eca-miR-1244 mature miRNA
• Sequence: 46 - GAGUGGUUGGUUUGUAUGAGAUGGUU - 71
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131