miRBase entry: eca-mir-208b

Stem-loop eca-mir-208b


Accession
MI0012656
Description
Equus caballus eca-mir-208b precursor miRNA
Gene family
MIPF0000178; mir-208

Literature search
3 open access papers mention eca-mir-208b
(11 sentences)

Sequence

3 reads, 0 reads per million, 1 experiments
ccucucagggaagcuuuuugcucgcguuauguuucucauccgaauAUAAGACGAACAAAAGGUUUGUcugagggcag
.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).))))))))...

Structure
--c        g          c   cg        cu 
   cucucagg aagcuuuuug ucg  uuauguuu  c
   |||||||| |||||||||| |||  ||||||||  a
   gggagucU UUUGGAAAAC AGC  AAUAuaag  u
gac        G          A   AG        cc 


Annotation confidence Not enough data
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Genome context
chr1: 161511731-161511807 [-]

Database links

Mature eca-miR-208b

Accession MIMAT0012900
Description Equus caballus eca-miR-208b mature miRNA
Sequence 46 - AUAAGACGAACAAAAGGUUUGU - 67
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131