Stem-loop eca-mir-551a

Accession

MI0012677

Description

Equus caballus eca-mir-551a precursor miRNA

Gene family

MIPF0000360; mir-551

Sequence

4 reads, 1 reads per million, 1 experiments

uggaaauccagagugggugaggccugucugaccauuucuagGCGACCCACUCUUGGUUUCCA
((((((((.(((((((((...(((((............))))).))))))))).))))))))

Structure

        c         gag     ucuga 
uggaaauc agagugggu   gccug     c
|||||||| |||||||||   |||||      
ACCUUUGG UCUCACCCA   CGgau     c
        U         --G     cuuua 

Annotation confidence Not enough data

Genome context

chr2: 46536547-46536608 [+]

Mature eca-miR-551a

• Accession: MIMAT0012921
• Description: Equus caballus eca-miR-551a mature miRNA
• Sequence: 42 - GCGACCCACUCUUGGUUUCCA - 62
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131