miRBase entry: eca-mir-1261

Stem-loop eca-mir-1261


Accession
MI0012680
Description
Equus caballus eca-mir-1261 precursor miRNA
Gene family
MIPF0000802; mir-1261


Sequence

2 reads, 0 reads per million, 1 experiments
ugcuGUGGAUUAGGCUUUGGCUUaagggaauauuguggcugauuugaucuucuauccagaccacugaagcuuucuccauaucagc
.((((((((..(((((((((......(((......(((..(((...)))..))))))......)))))))))..))))...))))

Structure
u    ---    UU         CUUaag   auauug   cu   u 
 gcuG   UGGA  AGGCUUUGG      gga      ugg  gau  
 ||||   ||||  |||||||||      |||      |||  ||| u
 cgac   accu  uucgaaguc      ccu      auc  cua  
-    uau    cu         accaga   ------   uu   g 


Annotation confidence Not enough data
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Genome context
chr3: 90276715-90276799 [+]

Database links

Mature eca-miR-1261

Accession MIMAT0012924
Description Equus caballus eca-miR-1261 mature miRNA
Sequence 5 - GUGGAUUAGGCUUUGGCUU - 23
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131