Stem-loop sequence eca-mir-684

Accession MI0012685
Description Equus caballus miR-684 stem-loop
Gene family MIPF0000337; mir-684
Stem-loop 
guagg     c     -uuag       u      -   --uaaa g 
     gcaau ugucu     gaaggga agauua cuc      a a
     ||||| |||||     ||||||| |||||| |||      |  
     uguug acgga     cuucccu uuugau gag      u a
-----     u     cuuaa       -      a   ccuaag a
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Genome context
Coordinates (EquCab2) Overlapping transcripts
3: 44103220-44103305 [-]
sense
ENSECAT00000017877 ; PDLIM5; intron 6
Database links
  • ENTREZGENE: 100314795;MIR684

Mature sequence eca-miR-684

Accession MIMAT0012930
Sequence

59 -  

aguuuucccuucaauucag

 - 77

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Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).