miRBase entry: eca-mir-592

Stem-loop eca-mir-592


Accession
MI0012699
Description
Equus caballus eca-mir-592 precursor miRNA
Gene family
MIPF0000340; mir-592


Sequence

250 reads, 38 reads per million, 1 experiments
uuaugccaugacaUUGUGUCAAUAUGCGAUGAUGUgugugauggcacagcgucaucacguggugacgcaacaucaugacguaa
.((((.(((((..((((((((.((((.((((((((((((....))))).))))))).)))).))))))))..))))).)))).

Structure
u    c     ca        A    C       -     g 
 uaug cauga  UUGUGUCA UAUG GAUGAUG Ugugu a
 |||| |||||  |||||||| |||| ||||||| |||||  
 augc guacu  aacgcagu gugc cuacugc acacg u
a    a     ac        g    a       g     g 


Annotation confidence Not enough data
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Genome context
chr4: 82406028-82406110 [-]

Database links

Mature eca-miR-592

Accession MIMAT0012946
Description Equus caballus eca-miR-592 mature miRNA
Sequence 14 - UUGUGUCAAUAUGCGAUGAUGU - 35
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131