miRBase entry: eca-mir-101-1

Stem-loop eca-mir-101-1


Accession
MI0012703
Description
Equus caballus eca-mir-101-1 precursor miRNA
Gene family
MIPF0000046; mir-101

Literature search
1 open access papers mention eca-mir-101-1
(2 sentences)

Sequence

5571 reads, 843 reads per million, 1 experiments
cucaguuaucacagugcugaugcugucaguucuaaaggUACAGUACUGUGAUAACUGAA
.((((((((((((((((((.((((............)))))))))))))))))))))).

Structure
c                  a    gucag 
 ucaguuaucacagugcug ugcu     u
 |||||||||||||||||| ||||      
 AGUCAAUAGUGUCAUGAC AUgg     u
A                  -    aaauc 


Annotation confidence High
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Genome context
chr5: 95527930-95527988 [+]

Database links

Mature eca-miR-101

Accession MIMAT0012951
Description Equus caballus eca-miR-101 mature miRNA
Sequence 39 - UACAGUACUGUGAUAACUGAA - 59
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131