Stem-loop eca-mir-214

Accession

MI0012714

Description

Equus caballus eca-mir-214 precursor miRNA

Gene family

MIPF0000062; mir-214

Literature search

2 open access papers mention eca-mir-214
(17 sentences)

Sequence

1893 reads, 287 reads per million, 1 experiments

ucugccugucuacacuugcugugcagaacauccgcucaccuguACAGCAGGCACAGACAGGCAGU
.((((((((((...((((((((((((.............))))))))))))...)))))))))).

Structure

u          aca            aacau 
 cugccugucu   cuugcugugcag     c
 ||||||||||   ||||||||||||     c
 GACGGACAGA   GGACGACAuguc     g
U          CAC            cacuc 

Annotation confidence High

Genome context

chr5: 8098955-8099019 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-214

Mature eca-miR-214

• Accession: MIMAT0012963
• Description: Equus caballus eca-miR-214 mature miRNA
• Sequence: 44 - ACAGCAGGCACAGACAGGCAGU - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131