miRBase entry: eca-mir-1204

Stem-loop eca-mir-1204


Accession
MI0012754
Description
Equus caballus eca-mir-1204 precursor miRNA
Gene family
MIPF0000671; mir-1204


Sequence

gccUCGUGGCCUGGUCCCCACUAUuugagaagagucacaucucggaggugaggaccgccucguggua
(((.((.(((..(((((.((((.(((((((.(.....).))))))))))).)))))))).)).))).

Structure
-   U  U   CU     C    A       a a 
 gcc CG GGC  GGUCC CACU Uuugaga g g
 ||| || |||  ||||| |||| ||||||| | u
 ugg gc ccg  ccagg gugg aggcucu c c
a   u  u   --     a    -       a a 


Annotation confidence Not enough data
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Genome context
chr9: 69391872-69391938 [+]

Database links

Mature eca-miR-1204

Accession MIMAT0013003
Description Equus caballus eca-miR-1204 mature miRNA
Sequence 4 - UCGUGGCCUGGUCCCCACUAU - 24
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131