miRBase entry: eca-mir-330

Stem-loop eca-mir-330


Accession
MI0012763
Description
Equus caballus eca-mir-330 precursor miRNA
Gene family
MIPF0000200; mir-330


Sequence

56 reads, 8 reads per million, 1 experiments
UCUCUGGGCCUGUGUCUUAGGCucuucaaagaucaaccgagcaaaagcacacggccugcagaga
((((((((((((((.(((..((((..............))))..))))))).))))..))))))

Structure
      --    -    U   AG    uucaaa 
UCUCUG  GGCC UGUG CUU  GCuc      g
||||||  |||| |||| |||  ||||       
agagac  ccgg acac gaa  cgag      a
      gu    c    -   aa    ccaacu 


Annotation confidence Not enough data
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Genome context
chr10: 16156757-16156820 [-]

Database links

Mature eca-miR-330

Accession MIMAT0013012
Description Equus caballus eca-miR-330 mature miRNA
Sequence 1 - UCUCUGGGCCUGUGUCUUAGGC - 22
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131