Stem-loop eca-mir-212

Accession

MI0012777

Description

Equus caballus eca-mir-212 precursor miRNA

Gene family

MIPF0000065; mir-132

Sequence

13 reads, 2 reads per million, 1 experiments

ccuuggcucuagacugcuuacugcccgggccgcccucagUAACAGUCUCCAGUCACGGCC
((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))..

Structure

--  u     cu      c      ccc   c 
  cc uggcu  agacug uuacug   ggg  
  || |||||  |||||| ||||||   ||| c
  GG ACUGA  UCUGAC AAUgac   ccc  
CC  C     CC      -      --u   g 

Annotation confidence Not enough data

Genome context

chr11: 45640251-45640310 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-212

Mature eca-miR-212

• Accession: MIMAT0013030
• Description: Equus caballus eca-miR-212 mature miRNA
• Sequence: 40 - UAACAGUCUCCAGUCACGGCC - 60
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131