miRBase entry: eca-mir-324

Stem-loop eca-mir-324


Accession
MI0012780
Description
Equus caballus eca-mir-324 precursor miRNA
Gene family
MIPF0000165; mir-324

Literature search
1 open access papers mention eca-mir-324
(2 sentences)

Sequence

58 reads, 9 reads per million, 1 experiments
cugacuaugccucccCGCAUCCCCUAGGGCAUUGGUGUaaagcuggagacCCACUGCCCCAGGUGCUGCUGGggguuguaguc
..(((((((.(((((.(((.(.(((.(((((.(((.((..........))))).))))).))).).))).))))).)))))))

Structure
cu       c     C   U C   A     U   U  aaag 
  gacuaug cuccc GCA C CCU GGGCA UGG GU    c
  ||||||| ||||| ||| | ||| ||||| ||| ||     
  cugaugu gggGG CGU G GGA CCCGU ACC ca    u
--       u     U   C U   C     C   -  gagg 


Annotation confidence Not enough data
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Genome context
chr11: 50242526-50242608 [-]

Database links

Mature eca-miR-324-5p

Accession MIMAT0013033
Description Equus caballus eca-miR-324-5p mature miRNA
Sequence 16 - CGCAUCCCCUAGGGCAUUGGUGU - 38
Evidence not_experimental

Mature eca-miR-324-3p

Accession MIMAT0013034
Description Equus caballus eca-miR-324-3p mature miRNA
Sequence 51 - CCACUGCCCCAGGUGCUGCUGG - 72
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131