miRBase entry: eca-mir-33b

Stem-loop eca-mir-33b


Accession
MI0012782
Description
Equus caballus eca-mir-33b precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

2 reads, 0 reads per million, 1 experiments
GUGCAUUGCUGUUGCAUUGCacgugugugaggcgggugcagugccucggcagugca
.((((((((((..(((((((((.(((.....))).)))))))))..))))))))))

Structure
G          UU         g   g 
 UGCAUUGCUG  GCAUUGCac ugu u
 ||||||||||  ||||||||| ||| g
 acgugacggc  cgugacgug gcg a
-          uc         g   g 


Annotation confidence Not enough data
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Genome context
chr11: 60069240-60069295 [+]

Database links

Mature eca-miR-33b

Accession MIMAT0013037
Description Equus caballus eca-miR-33b mature miRNA
Sequence 1 - GUGCAUUGCUGUUGCAUUGC - 20
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131