miRBase entry: eca-mir-451

Stem-loop eca-mir-451


Accession
MI0012785
Description
Equus caballus eca-mir-451 precursor miRNA
Gene family
MIPF0000148; mir-451

Literature search
1 open access papers mention eca-mir-451
(1 sentences)

Sequence

2711 reads, 410 reads per million, 1 experiments
cuugggaaugucgaggAAACCGUUACCAUUACUGUGUUuaguaaugguaacgguucucuugcuguacccaga
.(((((.(((.(((((.(((((((((((((((((....))))))))))))))))).))))).))).))))).

Structure
c     a   u     A                 U 
 uuggg aug cgagg AACCGUUACCAUUACUG G
 ||||| ||| ||||| |||||||||||||||||  
 gaccc ugu guucu uuggcaaugguaaugau U
a     a   c     c                 U 


Annotation confidence Not enough data
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Genome context
chr11: 42750408-42750479 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-451
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-451

Accession MIMAT0013041
Description Equus caballus eca-miR-451 mature miRNA
Sequence 17 - AAACCGUUACCAUUACUGUGUU - 38
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131