Stem-loop eca-mir-670

Accession

MI0012795

Description

Equus caballus eca-mir-670 precursor miRNA

Gene family

MIPF0000734; mir-670

Sequence

17 reads, 3 reads per million, 1 experiments

gguuuagggguggaucugacGUCCCUGAGUGUAUGUGGUGAAccugaauuugccuuggguuuccucauauucauucaggagugucaguucccccuucacu
(((..(((((.(((.((((((.(((((((((.((((((.((((((((.......)))))))).).))))).)))))))).)))))))))))))))..)))

Structure

   uu     u   u      U -        U     - U        au 
ggu  agggg gga cugacG C CCUGAGUG AUGUG G GAAccuga  u
|||  ||||| ||| |||||| | |||||||| ||||| | ||||||||  u
uca  ucccc cuu gacugu g ggacuuac uauac c uuuggguu  g
   cu     -   -      - a        u     u c        cc 

Annotation confidence Not enough data

Genome context

chr12: 8509294-8509393 [+]

Mature eca-miR-670

• Accession: MIMAT0013052
• Description: Equus caballus eca-miR-670 mature miRNA
• Sequence: 21 - GUCCCUGAGUGUAUGUGGUGAA - 42
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131