Stem-loop eca-mir-378

Accession

MI0012812

Description

Equus caballus eca-mir-378 precursor miRNA

Gene family

MIPF0000168; mir-378

Literature search

1 open access papers mention eca-mir-378
(1 sentences)

Sequence

1516 reads, 229 reads per million, 1 experiments

agggcuccugacuccagguccuguguguuaccucgaaauagcACUGGACUUGGAGUCAGAAGGccu
(((.((.((((((((((((((.((((..(........)..)))).)))))))))))))).)).)))

Structure

   g  c              u    gu acc 
agg cu cugacuccaggucc gugu  u   u
||| || |||||||||||||| ||||  |    
ucc GA GACUGAGGUUCAGG CAcg  a   c
   G  A              U    au aag 

Annotation confidence Not enough data

Genome context

chr14: 28186796-28186861 [-]

Mature eca-miR-378

• Accession: MIMAT0013068
• Description: Equus caballus eca-miR-378 mature miRNA
• Sequence: 43 - ACUGGACUUGGAGUCAGAAGG - 63
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131