Stem-loop eca-mir-216a

Accession

MI0012817

Description

Equus caballus eca-mir-216a precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

UAAUCUCAGCUGGCAACUGUGAgauguucauaaauccccacaguggucucugggauua
(((((((((..(((.((((((.(((........)))..)))))).))).)))))))))

Structure

         CU   A      -A   guu 
UAAUCUCAG  GGC ACUGUG  gau   c
|||||||||  ||| ||||||  |||    
auuaggguc  cug ugacac  cua   a
         -u   g      cc   aau 

Annotation confidence Not enough data

Genome context

chr15: 44369414-44369471 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-216a

Mature eca-miR-216a

• Accession: MIMAT0013072
• Description: Equus caballus eca-miR-216a mature miRNA
• Sequence: 1 - UAAUCUCAGCUGGCAACUGUGA - 22
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131