Stem-loop eca-mir-128-1

Accession

MI0012821

Description

Equus caballus eca-mir-128-1 precursor miRNA

Gene family

MIPF0000048; mir-128

Literature search

2 open access papers mention eca-mir-128-1
(21 sentences)

Sequence

844 reads, 128 reads per million, 1 experiments

ugugcagugggaaggggggccgaugcacuguacgagagugaguagcaggucUCACAGUGAACCGGUCUCUUUcccuacuguguc
...((((((((.((((((((((...((((((..((((.(........).))))))))))...)))))))))).))))))))...

Structure

ugu        a          aug      ac    g gag 
   gcaguggg aggggggccg   cacugu  gaga u   u
   |||||||| ||||||||||   ||||||  |||| |    
   ugucaucc UUUCUCUGGC   GUGACA  CUcu g   a
cug        c          CAA      --    g acg 

Annotation confidence Not enough data

Genome context

chr16: 49087163-49087246 [-]

Mature eca-miR-128

• Accession: MIMAT0013076
• Description: Equus caballus eca-miR-128 mature miRNA
• Sequence: 52 - UCACAGUGAACCGGUCUCUUU - 72
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131