miRBase entry: eca-mir-711

Stem-loop eca-mir-711


Accession
MI0012827
Description
Equus caballus eca-mir-711 precursor miRNA
Gene family
MIPF0000748; mir-711


Sequence

acuuuaagucucuuuucagggugccacaggcaaagcugGGGACCCAGGGAGAGACGUAAGu
((((...(((((((((..((((.((.(((......))))).)))).)))))))))..))))

Structure
    uaa         ca    g  a   gc 
acuu   gucucuuuu  gggu cc cag  a
||||   |||||||||  |||| || |||   
uGAA   CAGAGAGGG  CCCA GG guc  a
    -UG         -A    G  -   ga 


Annotation confidence Not enough data
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Genome context
chr16: 38391299-38391359 [+]

Database links

Mature eca-miR-711

Accession MIMAT0013080
Description Equus caballus eca-miR-711 mature miRNA
Sequence 39 - GGGACCCAGGGAGAGACGUAAG - 60
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131