miRBase entry: eca-mir-582

Stem-loop eca-mir-582


Accession
MI0012852
Description
Equus caballus eca-mir-582 precursor miRNA
Gene family
MIPF0000417; mir-582


Sequence

9 reads, 1 reads per million, 1 experiments
uuuggUUACAGUUGUUCAACCAGUUACUaaucuaacuaauugUAACCGGUUGAACAACUGAACCcaaa
...((((.(((((((((((((.(((((..............))))).)))))))))))))))))....

Structure
-uuu    A             A     Uaaucu 
    ggUU CAGUUGUUCAACC GUUAC      a
    |||| ||||||||||||| |||||       
    CCAA GUCAACAAGUUGG CAAUg      a
aaac    -             C     uuaauc 


Annotation confidence Not enough data
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Genome context
chr21: 13258881-13258948 [+]

Database links

Mature eca-miR-582-5p

Accession MIMAT0013103
Description Equus caballus eca-miR-582-5p mature miRNA
Sequence 6 - UUACAGUUGUUCAACCAGUUACU - 28
Evidence not_experimental

Mature eca-miR-582-3p

Accession MIMAT0013104
Description Equus caballus eca-miR-582-3p mature miRNA
Sequence 43 - UAACCGGUUGAACAACUGAACC - 64
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131