Stem-loop eca-mir-103

Accession

MI0012854

Description

Equus caballus eca-mir-103 precursor miRNA

Gene family

MIPF0000024; mir-103

Literature search

3 open access papers mention eca-mir-103
(11 sentences)

Sequence

4734 reads, 717 reads per million, 1 experiments

ucgugcuuucagcuucuuuacagugcugccuuguagcauucaggucaAGCAGCAUUGUACAGGGCUAUGAaagaacca
..((.(((((((((.((.(((((((((((.(((.(.(.....).))))))))))))))).)))))..)))))).))..

Structure

uc  g      --   u  u           c   u g a 
  gu cuuuca  gcu cu uacagugcugc uug a c u
  || ||||||  ||| || ||||||||||| ||| | | u
  ca gaaAGU  CGG GA AUGUUACGACG Aac u g c
ac  a      AU   -  C           -   - g a 

Annotation confidence Not enough data

Genome context

chr22: 19043286-19043363 [-]

Mature eca-miR-103

• Accession: MIMAT0013105
• Description: Equus caballus eca-miR-103 mature miRNA
• Sequence: 48 - AGCAGCAUUGUACAGGGCUAUGA - 70
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131