Stem-loop eca-mir-23b

Accession

MI0012863

Description

Equus caballus eca-mir-23b precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

1773 reads, 268 reads per million, 1 experiments

ggcugcuuggguuccuggcaugcugauuugugacuuaagauuaaaAUCACAUUGCCAGGGAUUACCacgcaacc
((.(((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))).))

Structure

  c   u   --          -  c      gugacu 
gg ugc ugg  guuccuggca ug ugauuu      u
|| ||| |||  |||||||||| || ||||||       
cc acg aCC  UAGGGACCGU AC ACUAaa      a
  a   c   AU          U  -      auuaga 

Annotation confidence Not enough data

Genome context

chr23: 2317924-2317997 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from eca-mir-23b

Mature eca-miR-23b

• Accession: MIMAT0013113
• Description: Equus caballus eca-miR-23b mature miRNA
• Sequence: 46 - AUCACAUUGCCAGGGAUUACC - 66
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131