Stem-loop eca-mir-544b

Accession

MI0012868

Description

Equus caballus eca-mir-544b precursor miRNA

Gene family

MIPF0000436; mir-544

Sequence

ggcaucuuguuaaaacgcagacuuggauucagcaggucugggaugaggcccaagAUUCUGCAUUUUUAACAAGUUC
.....((((((((((.((((((((((.((((.(........).))))..)))))..)))))..))))))))))...

Structure

ggcau          -c     --     -a    g agg 
     cuuguuaaaa  gcaga  cuugg  uuca c   u
     ||||||||||  |||||  |||||  |||| |    
     GAACAAUUUU  CGUCU  gaacc  gagu g   c
--CUU          UA     UA     cg    a ggu 

Annotation confidence Not enough data

Genome context

chr23: 5343865-5343940 [+]

Mature eca-miR-544b

• Accession: MIMAT0013118
• Description: Equus caballus eca-miR-544b mature miRNA
• Sequence: 55 - AUUCUGCAUUUUUAACAAGUUC - 76
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131