Stem-loop sequence eca-mir-299

Accession MI0012880
Description Equus caballus miR-299 stem-loop
Gene family MIPF0000186; mir-299
Stem-loop 
     a                      uu 
aagaa ugguuuaccgucccacauacau  u
||||| ||||||||||||||||||||||  g
uucuu gccaaaugguaggguguaugua  a
     c                      ug
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Genome context
Coordinates (EquCab2) Overlapping transcripts
24: 42896363-42896425 [+]
intergenic
Clustered miRNAs
< 10kb from eca-mir-299
eca-mir-379 24: 42894643-42894709 [+]
eca-mir-411 24: 42895895-42895976 [+]
eca-mir-299 24: 42896363-42896425 [+]
eca-mir-380 24: 42897592-42897652 [+]
eca-mir-1197 24: 42898113-42898232 [+]
eca-mir-323 24: 42898304-42898389 [+]
eca-mir-758 24: 42898599-42898683 [+]
eca-mir-329 24: 42899352-42899449 [+]
eca-mir-494 24: 42902171-42902251 [+]
eca-mir-1193 24: 42902577-42902697 [+]
eca-mir-543 24: 42904247-42904318 [+]
eca-mir-495 24: 42906084-42906165 [+]
Database links
  • ENTREZGENE: 100315022;MIR299

Mature sequence eca-miR-299

Accession MIMAT0013130
Sequence

39 -  

uaugugggaugguaaaccgcuu

 - 60

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Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).