miRBase entry: eca-mir-376a

Stem-loop eca-mir-376a


Accession
MI0012888
Description
Equus caballus eca-mir-376a precursor miRNA
Gene family
MIPF0000091; mir-368


Sequence

91 reads, 14 reads per million, 1 experiments
uaaaagguagauucuccuucuaugaguacaauauuuaugauuaAUCAUAGAGGAAAAUCCACGUuuuc
.((((.((.((((.((((.((((((...................)))))))))).)))).)).)))).

Structure
u    g  a    c    u      guacaaua 
 aaaa gu gauu uccu cuauga        u
 |||| || |||| |||| ||||||        u
 uuuU CA CUAA AGGA GAUACU        u
c    G  C    A    -      Aauuagua 


Annotation confidence Not enough data
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Genome context
chr24: 42912234-42912301 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from eca-mir-376a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-376a

Accession MIMAT0013143
Description Equus caballus eca-miR-376a mature miRNA
Sequence 44 - AUCAUAGAGGAAAAUCCACGU - 64
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131