Stem-loop sequence eca-mir-495

Accession MI0012908
Description Equus caballus miR-495 stem-loop
Gene family MIPF0000110; mir-329
Stem-loop 
u   c  u          u  -       au     - uug 
 ggu cc gaaaagaagu gc ccauguu  uuucg c   a
 ||| || |||||||||| || |||||||  ||||| |   u
 cua gg uuuuucuuca cg gguacaa  aaagc g   a
a   u  c          -  u       ac     a ugu
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Genome context
Coordinates (EquCab2) Overlapping transcripts
24: 42906084-42906165 [+]
intergenic
Clustered miRNAs
< 10kb from eca-mir-495
eca-mir-299 24: 42896363-42896425 [+]
eca-mir-380 24: 42897592-42897652 [+]
eca-mir-1197 24: 42898113-42898232 [+]
eca-mir-323 24: 42898304-42898389 [+]
eca-mir-758 24: 42898599-42898683 [+]
eca-mir-329 24: 42899352-42899449 [+]
eca-mir-494 24: 42902171-42902251 [+]
eca-mir-1193 24: 42902577-42902697 [+]
eca-mir-543 24: 42904247-42904318 [+]
eca-mir-495 24: 42906084-42906165 [+]
eca-mir-376c 24: 42911104-42911169 [+]
eca-mir-376b 24: 42911856-42911937 [+]
eca-mir-376a 24: 42912234-42912301 [+]
eca-mir-1185 24: 42914351-42914436 [+]
eca-mir-381 24: 42916054-42916128 [+]
Database links
  • ENTREZGENE: 100315115;MIR495

Mature sequence eca-miR-495

Accession MIMAT0013165
Sequence

50 -  

aaacaaacauggugcacuucuu

 - 71

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Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).