miRBase entry: eca-mir-1264

Stem-loop eca-mir-1264


Accession
MI0012943
Description
Equus caballus eca-mir-1264 precursor miRNA
Gene family
MIPF0000098; mir-95


Sequence

8 reads, 1 reads per million, 1 experiments
agguccucaauaaguauuuguugaaagaauaaaugaaccaaCAAGUCUUAUUUGAGCACCUGUUaugug
((((.(((((((((.((((((((...............)))))))))))).))))).))))........

Structure
--------    c     -    u        aaagaa 
        aggu cucaa uaag auuuguug      u
        |||| ||||| |||| ||||||||      a
        UCCA GAGUU AUUC UGAACaac      a
guguaUUG    C     U    -        caagua 


Annotation confidence Not enough data
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Genome context
chrX: 90707867-90707935 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-1264
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-1264

Accession MIMAT0013195
Description Equus caballus eca-miR-1264 mature miRNA
Sequence 42 - CAAGUCUUAUUUGAGCACCUGUU - 64
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131